NSTU Official Website

EXTERNAL PROFILES

Professor

Mehede Hassan Rubel (PhD)

Dr. Mehede Hassan Rubel is an Associate Professor in the Department of Agriculture at Noakhali Science and Technology University (NSTU). His research focuses on plant molecular biology, plant growth-promoting bacteria (PGPB), bioinformatics, and host-pathogen interactions. He has led several government-funded projects and published over 35 research articles in reputed journals. Dr. Rubel earned his PhD on molecular marker development and gene expression profiling in cabbage and is currently working on breeding stress-tolerant crops for the southern region of Bangladesh.

Agriculture

BIOGRAPHY

Dr. Mehede Hassan Rubel has been working as an Associate Professor at the Department of Agriculture at Noakhali Science and Technology University (NSTU) since 26 September 2020; joined as a Lecturer at the department on 26th May 2013. His research background includes a strong foundation in the biological sciences through hunting of different project activities, focusing on characterization of different plants, molecular biology, plant growth-promoting bacteria (PGPB), bioinformatics, and host-pathogen interactions. He has been participated in several national and international seminars, workshops, conference related to climate resilient crops and received “Best Poster Awards”. He achieved National Science, Information and Communication Technology (NSICT) Fellowship during his Master of Science study. He completed several projects as a Project Investigator like Special Allocation funded by the Ministry of Science and Technology (MoST), GoB and UGC research fund by NSTU Research Cell, NSTU. He successfully completed several training courses e.g., Statistical Package for Postgraduates in Agriculture, Project Cycle Management on Sustainable Climate Smart Agriculture for Govt. Officials, Foundation training for University Teachers etc. He achieved his PhD on “Development of molecular markers for pathovars and races of Xanthomonas campestris and profiling glucosinolate biosynthetic gene expressions modulated by black rot in cabbage”. Now, he is working on breeding for developing biotic and abiotic stress tolerant crops especially southern part of Bangladesh and molecular characterization of pathogens causing diseases on major crops in Bangladesh, and published thirty-six (36) articles in renowned journals with high impact factors.

RESEARCH INTERESTS

Stress Breeding Plant Microbe Interactions molecular Biology and Climate resilence

2016 - 2019

Doctor of Philosophy (PhD)

Horticulture (Major in Biotechnology)

Sunchon National University, Republic of Korea

2010 - 2012

Master of Science in Genetics and Plant Breeding

Genetics and Plant Breeding

Bangladesh Agricultural University, Mymensingh-2202, Bangladesh

2006 - 2010

Bachelor of Science in Agriculture

Agriculture

Bangladesh Agricultural University, Mymensingh-2202, Bangladesh

2003 - 2005

Higher Secondary Certificate

Science

Jessore Cantonment College, Jessore-6600, Bangladesh

1999 - 2003

Secondary School Certificate

Science

Kutuba Secondary School, Borhanuddin, Bhola-6600, Bangladesh

Last updated on 2026-07-22 11:48:32

Assistant Professor

Agriculture, Noakhali Science and Technology University

2015-05-26 to
2025-09-25

Associate Professor

Agriculture, Noakhali Science and Technology University

2020-09-22 to
2025-08-15

Lecturer

Agriculture, Noakhali Science and Technology University

2013-05-26 to
2015-05-15

Professor

Agriculture, Noakhali Science and Technology University

2025-08-16 to

2023-08-23

Bioinformatics for Beginners

Description: Enter Training Description

Organization: National Institute of Biotechnology, Ministry of Science and Technology

2021-04-18

Statistical Package for Postgraduates in Agriculture

Description: Enter Training Description

Organization: Bangladesh Agricultural University

2019-12-17

Project Cycle Management on Sustainable Climate Smart Agriculture for Govt. Officials

Description: Enter Training Description

Organization: Graduate Training Institute (GTI), Bangladesh Agricultural University, Mymensingh

2014-03-08

Foundation training for University Teachers

Description: Enter Training Description

Organization: Graduate Training Institute (GTI), Bangladesh Agricultural University, Mymensingh

2013-01-06

Statistical Package: Mstatc, PLABSTAT, BASICA and STATGRAPHICS Plus

Description: Enter Training Description

Organization: Genetics and plant breeding, Bangladesh Agricultural University, Mymensingh

2011-11-01

Advanced course on Communicative English

Description: Enter Training Description

Organization: Department of Languages, Bangladesh Agricultural University, Mymensingh

2009-10-17

Basics of MS office

Description: Enter Training Description

Organization: Graduate Training Institute, Bangladesh Agricultural University, Mymensingh.

Last Updated: 2025-08-05 11:04:36

2025-10-29

Novel Technologies and Emerging Frontiers of Biological Research

Description: Promoting knowledge exchange on recent advances in biological sciences and fostering research collaboration among researchers, faculty members, and students. Training Description

Organization: Faculty of Biological science, Noakhali Science and Technology University (NSTU)

2025-10-29

Innovation Shaping the Future of Agriculture and Safe Trade: Learnings from Pesticide Management in Asia and the Pacific

Description: Enhancing knowledge on sustainable pesticide management, agricultural innovation, food safety, and safe international trade.

Organization: the STDF Public-Private Partnership (PPP) Practitioner Group, CropLife International, and the Asia-Pacific Association of Agricultural Research Institutions (APAARI).

2025-08-06

Took part in the International Webinar on The Rhizosphere microbiome: the second plant genome

Description: Enter Training Description

Organization: GetGenome, The Sainsbury Laboratory (TSL), Norwich, UK

2025-06-11

Metagenomic insights into diversity, function and dysbiosis of the microbiome of octocorals

Description: Gaining knowledge on metagenomic approaches for exploring microbial diversity, functional profiles, host–microbiome interactions, and microbiome dysbiosis in marine ecosystems.

Organization: the GetGenome, The Sainsbury Laboratory (TSL), Norwich, UK.

2025-05-19

Sequence Characterization of Soybean Vein Necrosis Virus (SVNV) from Field Isolates in Alabama

Description: Enhancing knowledge of viral genome sequencing, molecular characterization, genetic diversity, and epidemiology of SVNV for improved disease diagnosis and management.

Organization: Department of Genetics, Assuit University, Egypt.

2025-04-27

Intellectual Property Rights: Protecting Innovation in a Global Economy

Description: Enter Training Description

Organization: IQAC, NSTU.

2025-01-05

Writing ATF Sub-project Proposal

Description: Enter Training Description

Organization: IQAC, NSTU

2024-09-21

Interspecies small RNAs in plant-parasite communication

Description: Gaining insights into RNA-mediated cross-kingdom communication, host–parasite interactions, and the role of small RNAs in plant defense and pathogen virulence.

Organization: Global Network of Biotechnologists (GNOBB)

Last Updated: 2026-07-22 03:14:49

AWARDS AND ACHIEVEMENTS

1 Publication Award

NSTU ResearchCell

2 Best Poster Award

Khulna University, Bangladesh

3 Best Poster Award

Noakhali Science and Technology University, Bangladesh

4 National Science, Information and Communication Technology (NSICT)

Ministry of Science and Technology.

2027

Journal

First Report of Neochetina bruchi and Neochetina eichhorniae from Bangladesh

Authors: Sanjay Saha Sonet, Mohammed Mafizul Islam, Sumaya Akter, Jayanta Kumar Basak, Arnab Goswami, Mehede Hassan Rubel, Pijush Kanti Jhan

Journal: Indian Journal of Entomology

2026

Journal

Morpho-Molecular Identification and Race Detection of Xanthomonas campestris pv. campestris Causing Black Rot Disease of Cabbage in Bangladesh

Authors: Arnab Goswami, Nafisa Akter Sadia, Pijush Kanti Jhan, Mahmudul Hasan, Tofazzal Islam, Ujjal Kumar Nath, Jong-In Park, Mehede Hassan Rubel

Journal: Australasian Plant Pathology

2026

Journal

Complete genome sequence of Xanthomonas campestris pv. campestris strain NSTU\_AG-1 causing black rot disease isolated from infected cabbage leaves in Bangladesh

Authors: Arnab Goswami, Maksudur R Nayem, Pijush K Jhan, Amena Khatun, ABZN Rahman, Mahmudul Hasan, Swagato Dutta, Md T Islam, Jong-In Park, Mehede H Rubel

Journal: Microbiology Resource Announcements

2026

Journal

Mango wood biochar influences soil properties, growth, yield and nutritional quality of radish (Raphanus sativus L.) in coastal region of Bangladesh

Authors: T. Ferdous M. Nuruzzaman* M.G. Kibria, K. Hossen, M.H. Rubel, A. Khatun, R. Ahmed

Journal: Tropical Agriculture

2026

Journal

Optimizing temperature and humidity dynamics in laboratory mass rearing of Trichogramma egg parasitoids on the host Galleria mellonella

Authors: Arfanika Jahan Mim, Jui Chakrobortty, Aninda Arnob Pandit, Md Rakibul Islam, Md Asadur Rahman, Shimul Das, Md Mostofa Kamal, Eshrat Zahan Eshita, Mehede Hassan Rubel, Pritilata Mallick

Journal: Biocontrol Science and Technology

2026

Journal

Computational identification of a marine derived dual inhibitor for type 2 diabetes mellitus using integrated in silico approaches

Authors: Arnob Biswas, Tamal Paul, Md Iqbal Hossain, Bindu Shekhar Bahadur, Aminun Naher, Emon Mitra, Ananya Majumder, Ripu Chandra Das, Uma Shill, Nakul Chandra Bhowmick, others

Journal: Scientific Reports

2025

Journal

Genome-Wide Discovery and Characterization of Putative Antimicrobial Resistance-Associated Small Open Reading Frames (sORFs) in the Staphylococcus aureus Pan-Genome

Authors: Saad Khan, Mehede Hassan Rubel, Mahmudul Hasan, Juan Philippe Teixeira

2025

Journal

Morpho-Physiological and Phytochemical Profiling of Exotic Watermelon (Citrullus lanatus) Genotypes in Bangladesh

Authors: Md Shohel Tanvir, Khadijatul Kobra, Pijush Kanti Jhan, Md Mostafijur Rahman, Najmul Hossain, Md Mostofa Kamal, Shimul Das, Mehede Hassan Rubel

Journal: Advances in Agriculture

2025

Journal

Usability Assessment of Kitchen Waste for Organic Liquid Fertilizer from Bangladesh

Authors: Jakiya Hossain Moon, Pijush Kanti Jhan, Md Atiqur Rahman Bhuiyan, Mehede Hassan Rubel, Md Mahfuzur Rahman

Journal: Research in Agriculture Livestock and Fisheries

2025

Journal

Screening of Rice Genotypes for Salinity Tolerance at Seedling Stage Through SSR Marker

Authors: N Razia, S., Rubel, M.H., Mehedi, M.N.H., Ghosh, S.R., Ahmed, F., Nabi, K.E. and Hossain

Journal: Research in Agriculture Livestock and Fisheries

DOI: https://doi.org/10.3329/ralf.v12i1.81543

2025

Journal

Evaluation of rice genotypes using different concentration of NaCl at different growth stages

Authors: Sultana Razia, Mehede Hassan Rubel, Shahanaz Sultana, K. M. Ferdous, Jannatul and Nasiruddin

Journal: ournal of Bioscience and Agriculture Research

DOI: https://doi.org/10.18801/jbar.340225.329

2025

Journal

Assessment of Tomato Genotypes Using Morpho-physical and Biochemical Traits in Southern Bangladesh

Authors: Najmul Hossain, Mehede Hassan Rubel, Md Rafiqul Islam, Pijush Kanti Jhan, Md Mostofa Kamal, Kazi Ishrat Anjum, Md Mohammaed Nuruzzaman, Papia Rahman Moury

Journal: Research in Agriculture Livestock and Fisheries

DOI: https://doi.org/10.3329/ralf.v12i1.81528

2024

Journal

A sustainable methodological approach for mitigation of salt stress of rice seedlings in coastal regions: Identification of halotolerant rhizobacteria from Noakhali, Bangladesh and their impact

Authors: FM Ashik Mahmud, Md Aminul Islam, Mehede Hassan Rubel, Prosun Bhattacharya, Firoz Ahmed

Journal: MethodsX

DOI: https://doi.org/10.1016/j.mex.2024.102981

2024

Journal

MORPHOPHYSIOLOGICAL AND BIOCHEMICAL CHARACTERIZATION OF THE EXOTIC CABBAGE (BRASSICA OLERACEA VAR. CAPITATA L.) VARIETIES IN BANGLADESH

Authors: ZH Zahid, S Hoshain, MD Abuyusuf, JR Rahman, MH Rubel, R Ahmed

Journal: SABRAO J Breed Genet

DOI: http://doi.org/10.54910/sabrao2024.56.2.12

2024

Journal

Characterization and distribution of black rot disease causing pathogen-Xanthomonas campestris pv. campestris races of the Jeju Island, South Korea

Authors: Jeong-Eui Hong, Hee-Jin Kim, Mohammad Rashed Hossain, Mehede Hassan Rubel, Nihar Sahu, Sopheap Mao, Jong-Goo Kang, Hoy-Taek Kim, Masao Watanabe, Jong-In Park

Journal: ournal of Plant Pathology

DOI: https://doi.org/10.1007/s42161-023-01549-0

2023

Journal

Drought-responsive genes in tomato: meta-analysis of gene expression using machine learning

Authors: Rabiul Haq Chowdhury, Fatiha Sultana Eti, Rayhan Ahmed, Shipan Das Gupta, Pijush Kanti Jhan, Tofazzal Islam, Md Atiqur Rahman Bhuiyan, Mehede Hassan Rubel, Abul Khayer

Journal: Scientific reports

DOI: https://doi.org/10.1038/s41598-023-45942-2

2023

Journal

Effects of halotolerant rhizobacteria on rice seedlings under salinity stress

Authors: FM Ashik Mahmud, Md Aminul Islam, Mehede Hassan Rubel, Sanjoy Kumar Mukharjee, Manish Kumar, Prosun Bhattacharya, Firoz Ahmed

Journal: Science of the Total Environment

DOI: https://doi.org/10.1016/j.scitotenv.2023.163774

2023

Journal

Glucosinolates and Biotic Stress Tolerance in Brassicaceae with Emphasis on Cabbage: A Review

Authors: Md Abuyusuf, Mehede Hassan Rubel, Hoy-Taek Kim, Hee-Jeong Jung, Ill-Sup Nou, Jong-In Park

Journal: Biochemical Genetics

DOI: https://doi.org/10.1007/s10528-022-10269-6

2023

Journal

Reporting of Two Planthoppers and Six Leafhopper Species in Feni and Noakhali District of Bangladesh

Authors: Mehede Hassan Rubel and Pijush Kanti Jhan* Rakib Hasan, Shahjadi-Nur-Us Shams

2023

Journal

Effects of growing mediums on the growth and yield of pot grown chilli (Capsicum frutescens)

Authors: Md Jakaria Rahman, Md Sabuj Ali, Md Fuad Hassan, Md Rayhan Sikder, Mehede Hassan Rubel

Journal: Asian Journal of Crop, Soil Science and Plant Nutrition

2023

Journal

Effects of growing mediums on the growth and yield of pot-grown Yard long bean (Vigna unguiculata)

Authors: Prantika Datta, Zahidul Hasan Zahid, Mehede Hassan Rubel

Journal: Journal of Bioscience and Agriculture Research

DOI: https://doi.org/10.18801/jbar.300223.310

2022

Journal

Effect of medicinal plant extracts on seed germination and seedling growth of three cucurbitaceous crops

Authors: R Ahmed Sumi AA, PK Jhan, M.H. Rubel

Journal: Asian journal of Plant Sciences

DOI: 10.3923/ajps.2022.401.415

2022

Journal

Medicinal plants as biocontrol agents: An in vitro study on black rot pathogen of cabbage (Xanthomonas campestris pv. campestris)

Authors: Sumi A.A. , Khayer A. , Jhan P.K. , Rubel M.H.

Journal: Acta Agrobotanica

DOI: 10.5586/aa.759

2021

Journal

Development of Molecular Markers for Specific Detection of Xanthomonas campestris pv. incanae

Authors: Mehede Hassan Rubel, Denison Michael Immanuel Jesse, Ujjal Kumar Nath, Jung-Hee Jeong, Hoy-Taek Kim, Jong-In Park, Ill-Sup Nou

Journal: Plant Breed. Biotech.

DOI: https://doi.org/10.9787/PBB.2021.9.4.287

2021

Journal

SCREENING LABLAB BEAN GENOTYPES FOR HIGHER GRAIN YIELD AND RESISTANCE AGAINST BEAN COMMON MOSAIC VIRUS

Authors: MA Adnan, SA Raffi, MH Rubel, MMA Noor, AB Rahman, B Akhter, S Razia, MA Haque

Journal: SABRAO Journal of Breeding and Genetics

2021

Journal

APPRAISEMENT OF SALINITY STRESS ON GERMINATION AND SEEDLING DEVELOPMENT OF OKRA (Abelmoschus Esculentus L.)

Authors: Md Morshedul Islam, Akhinur Shila, Pijush Kanti Jhan, Mehede Hassan Rubel, Kawsar Hossen, Md Mostakim Billah Fahim, Rayhan Ahmed

Journal: Tropical Agroecosystems

DOI: 10.26480/taec.01.2021.52.56

2020

Journal

Development of PCR-Based Molecular Marker for Detection of Xanthomonas campestris pv. campestris Race 6, the Causative Agent of Black Rot of Brassicas

Authors: Khandker Shazia Afrin, Md Abdur Rahim, Mehede Hassan Rubel, Jong-In Park, Hee-Jeong Jung, Hoy-Taek Kim, Ill-Sup Nou

Journal: The Plant Pathology Journal

DOI: 10.5423/PPJ.OA.06.2020.0103

2020

Journal

Glucosinolate Profile and Glucosinolate Biosynthesis and Breakdown Gene Expression Manifested by Black Rot Disease Infection in Cabbage

Authors: Mehede Hassan Rubel, Md Abuyusuf, Ujjal Kumar Nath, Arif Hasan Khan Robin, Hee Jeong Jung, Hoy Taek Kim, Jong In Park, Ill Sup Nou

Journal: Plants

DOI: https://doi.org/10.3390/plants9091121

2019

Journal

Development of a marker for detection of Xanthomonas campestris pv. campestris races 1 and 2 in Brassica oleracea

Authors: Mehede Hassan Rubel, Sathishkumar Natarajan, Ujjal Kumar Nath, Michael Immanuel Jesse Denison, Jung Hee-Jeong, Kim Hoy-Taek, Park Jong-In, Nou Ill-Sup

Journal: Horticulture, Environment, and Biotechnology

DOI: https://doi.org/10.1007/s13580-019-00143-7

2019

Journal

Pathovar specific molecular detection of Xanthomonas campestris pv. campestris, the causal agent of black rot disease in cabbage

Authors: Mehede H Rubel, Sathishkumar Natarajan, Mohammad R Hossain, Ujjal K Nath, Khandker S Afrin, Ji-Hee Lee, Hee-Jeong Jung, Hoy-Taek Kim, Jong-In Park, Ill-Sup Nou

DOI: https://doi.org/10.1080/07060661.2019.1570973

2019

Journal

Authors: Mehede Hassan Rubel, Mohammad Rashed Hossain, Ujjal Kumar Nath, Sathishkumar Natarajan, Ji-Hee Lee, Hee-Jeong Jung, Hoy-Taek Kim, Jong-In Park, Ill-Sup Nou

Journal: Australasian Plant Pathology

DOI: https://doi.org/10.1007/s13313-019-0614-z

2018

Journal

Development of race-specific molecular marker for Xanthomonas campestris pv. campestris race 3, the causal agent of black rot of crucifers

Authors:

Journal: Canadian Journal of Plant Science

DOI: https://doi.org/10.1139/cjps-2018-0035

2018

Journal

Screening of Cabbage (Brassica oleracea L.) Germplasm for Resistance to Black Rot

Authors: Khandker Shazia Afrin, Md Abdur Rahim, Jong-In Park, Sathishkumar Natarajan, Mehede Hassan Rubel, Hoy-Taek Kim, Ill-Sup Nou

Journal: Plant breeding and biotechnology

DOI: https://doi.org/10.9787/PBB.2018.6.1.30

2017

Journal

Whole-Genome Re-Alignment Facilitates Development of Specific Molecular Markers for Races 1 and 4 of Xanthomonas campestris pv. campestris, the Cause of Black Rot Disease in Brassica oleracea

Authors: Mehede Hassan Rubel, Arif Hasan Khan Robin, Sathishkumar Natarajan, Joana G Vicente, Hoy-Taek Kim, Jong-In Park, Ill-Sup Nou

Journal: International journal of molecular sciences

DOI: https://doi.org/10.3390/ijms18122523

2016

Journal

nfluence of BAP and NAA on in vitro plantlet regeneration of local and exotic banana cultivars

Authors: Md A Hossain, MH Rubel, KM Nasiruddin, FZ Evamoni

Journal: ournal of Bioscience and Agriculture Research

DOI: 10.18801/jbar.060216.66

2015

Journal

Effect of Weeding Regime and Row Direction on Growth and Yield of Rice in Bangladesh

Authors: MA Alam, MMH Tipu, MMI Chowdhury, MH Rubel, MA Razzak

Journal: Research & Reviews: Journal of Crop Science and Technology

2015

Journal

Screening of Rice Varieties for Bacterial Leaf Blight Resistance by Using SSR Markers

Authors: Toufique Hossain Khan, Fatematuz Zuhura Evamoni, Mehede Hassan Rubel, Khondoker M Nasiruddin, Mahbubur Rahman

Journal: ournal of Bioscience and Agriculture Research

2014

Journal

EFFECT OF MULCHING ON THE SEED PRODUCTION OF ONION

Authors: MH Rubel, FB Boby, AB Siddique, K Hossen, MS Sultana

Journal: Int. J. Sustain. Agril. Tech

2014

Journal

GENETIC VARIATION AND RELATEDNESS FOR BLB RESISTANCE IN BRRI RICE USING RAPD MARKERS

Authors: Fatematuz Zuhura Evamoni, Mehede Hassan Rubel, Md Anwar Hossain

Journal: International Journal of Innovation and Applied Studies

2014

Journal

EVALUATION OF RICE GENOTYPES UNDER SALT STRESS AT THE SEEDLING AND REPRODUCTIVE STAGES USING PHENOTYPIC AND MOLECULAR MARKERS

Authors: Mehede Hassan Rubel, Lutful Hassan, Mirza Mofazzal Islam, Arif Hasan Khan Robin, Md Jahangir Alam

Journal: Pakistan Journal of Botany

2012

Journal

In Vitro Regeneration of High Yielding Indica Rice (Oryza sativa L.) Varieties

Authors: MJ Alam, M Imran, L Hassan, MH Rubel, M Shamsuddoha

Journal: Journal of Environmental Science and Natural Resources

DOI: https://doi.org/10.3329/jesnr.v5i1.11573

to Present Research

Green biosynthesis, characterization, potential effect on phytopathogen and molecular docking of silver and zinc oxide nanoparticles using betel leaf extract: A promising eco-friendly approach

Abstract: This study developed silver (AgNPs) and zinc oxide (ZnO-NPs) nanoparticles through green synthesis using betel leaf extract and characterized their physicochemical properties. The nanoparticles exhibited strong antimicrobial activity against important phytopathogens, while molecular docking analysis suggested potential interactions with key pathogen proteins, explaining their inhibitory effects. The findings demonstrate that plant-based nanoparticles are a promising, eco-friendly alternative for sustainable plant disease management.

to Present Research

Identification of a Novel Pantoea species; the Causal Agent of Rice Grain Discoloration: An Emerging Threat to Rice Production in Bangladesh

Abstract: The bacterial pathogen was identified at the species level using whole-genome sequencing (WGS) integrated with average nucleotide identity (ANI), digital DNA–DNA hybridization (dDDH), and core-genome phylogenetic analyses for accurate taxonomic classification, and the resulting manuscript has been submitted to a peer-reviewed scientific journal, where it is currently under review.

to Present Research

Isolation and characterization and Genomic Investigation of Potential Plant Growth-Promoting Rhizobacteria for Prototype Biofertilizer Development and Sustainable Crop Production

Abstract: otential plant growth-promoting rhizobacteria (PGPR) were isolated, characterized, and genomically investigated to identify beneficial traits for biofertilizer development. Promising isolates were evaluated for plant growth-promoting activities and developed into prototype biofertilizers to enhance sustainable crop production while reducing dependence on chemical fertilizers.

to Present Research

Sustainable Bacteriophage-Based Management of Major Bacterial Diseases in Crops

Abstract: This study aims to develop sustainable bacteriophage-based biocontrol strategies for managing major bacterial diseases of economically important crops in Bangladesh. Bacteriophages will be isolated, characterized, and formulated into effective biocontrol products, followed by greenhouse and field evaluations to provide an eco-friendly alternative to chemical bactericides and improve sustainable crop production.

to Present Research

Genomics-Driven Development of Plant Growth-Promoting Fungal Biofertilizers for Sustainable Agriculture

Abstract: Potential plant growth-promoting fungi (PGPF) were isolated, characterized, and genomically investigated to identify beneficial traits associated with plant growth promotion and stress tolerance. Promising fungal isolates were developed into prototype biofertilizers and evaluated for their ability to improve crop growth, yield, and soil health, providing a sustainable alternative to chemical fertilizers.

to Present Research

Morphocultural and Biochemical characterization of xanthan gum producing bacteria from Xanthomonas spp. isolated from different cruciferous plants

Abstract: Xanthomonas spp. were isolated from different cruciferous plants and characterized based on their morphological, cultural, and biochemical properties. The isolates were evaluated for xanthan gum production, revealing variability in growth characteristics and gum-producing ability. The study identified promising Xanthomonas isolates with high xanthan gum production potential for industrial and biotechnological applications.

to Present Research

Genome-Guided Development of Molecular Markers for Xanthomonas oryzae pv. oryzae and Pantoea ananatis Associated with Rice Bacterial Leaf Blight

Abstract: This study aims to develop genome-based molecular markers for the rapid and accurate detection of Xanthomonas oryzae pv. oryzae and Pantoea ananatis, the major bacterial pathogens associated with bacterial leaf blight (BLB) of rice. Comparative whole-genome analysis will be used to identify species-specific genetic markers, which will be validated for sensitive, reliable, and early diagnosis to support effective disease surveillance and management.

Last Updated: 2026-07-22 12:11:57

2026-01-01 to 2028-01-01 Project

Productivity Enhancement through Popularization of Improved Tomato Lines in the Southern Areas of Bangladesh and Reducing Post-Harvest Loss by Developing Value-Added Products

Abstract: This project aims to promote climate-resilient, saline-tolerant tomato cultivation in the coastal saline-prone areas of Bangladesh to enhance crop productivity, improve farmers' livelihoods, and strengthen food and nutritional security. It also seeks to develop and evaluate natural food colorant formulations from dried tomato and sweet red chili powders by analyzing their pigment composition, sensory quality, shelf-life stability, and consumer acceptability. The project will identify the most suitable formulation for culinary applications while supporting sustainable agriculture and value-added tomato processing.

Funding Agency: special Corporate Social Responsibility (CSR), Southeast Bank PLC.

Funding Amount: 30,000,000 (BDT)

Position: N/A

2025-07-01 to 2028-06-30 Project

Molecular Analysis and Sustainable Management of Club-root Disease (Plasmodiophora brassicae): A Growing Concern for Rapeseed-Mustard Production and Food Security in Bangladesh

Abstract: This project aims to identify the clubroot pathogen and screen Bangladeshi rapeseed-mustard varieties for resistance, develop sustainable disease management strategies using eco-friendly approaches, and investigate plant defense mechanisms through transcriptomic and metagenomic analyses. The findings will support the development of disease-resistant varieties, improve sustainable crop production, and enhance food and nutritional security in Bangladesh.

Funding Agency: BAS-USDA Program

Funding Amount: 53,55,000 (BDT)

Position: 1

2025-07-01 to 2026-06-30 Project

Morpho-Cultural and Molecular Characterization of Trichoderma spp. And Their Potential Impact on Mustard Seedlings

Abstract: This study isolated and identified indigenous Trichoderma asperellum from mustard roots in Bangladesh using morphological and ITS-based molecular analyses. Greenhouse evaluation showed that T. asperellum combined with liquid NPK fertilizer significantly enhanced seedling growth, biomass, leaf area, and chlorophyll content compared with NPK alone. The findings demonstrate the potential of native T. asperellum as an eco-friendly biofertilizer for sustainable mustard production in Bangladesh.

Funding Agency: Ministry of Science and Technology (MoST), Government of the Peoples Republic of Bangladesh

Funding Amount: 3,25,000 (BDT)

Position: N/A

2025-07-01 to 2026-06-30 Project

Seasonal Genomic Profiling of Xanthomonas oryzae pv. oryzae and AI-Guided Drug Design for Sustainable Management of Bacterial Leaf Blight in Rice

Abstract: This project aims to perform whole-genome sequencing and comparative genomics of seasonal Xanthomonas oryzae pv. oryzae (Xoo) isolates to reveal their genetic diversity, virulence factors, and mobilome dynamics in Bangladesh. It will also use AI/ML-based in silico drug design to identify lead compounds targeting conserved virulence proteins, supporting the development of sustainable strategies for bacterial leaf blight management.

Funding Agency: NSTU Research Cell (UGC)

Funding Amount: 2,20,000 (BDT)

Position: N/A

2024-07-01 to 2025-06-30 Project

Assessment of the Effects of Biostimulant on the Growth, Yield and Nutritional Quality of Cherry Tomatoes (Solanum lycopersicum var. cerasiforme) under Field Conditions

Abstract: This study evaluated the effects of the seaweed biostimulant Ascophyllum nodosum on the growth, biochemical traits, and yield of three cherry tomato varieties under RCBD. Biostimulant application significantly improved plant growth, fruit quality, and yield compared with the control. Overall, the 2% biostimulant treatment (T3) was most effective for enhancing morphological and biochemical traits, while the 1.5% treatment (T2) produced the highest yield, demonstrating the potential of seaweed biostimulants for sustainable cherry tomato production.

Funding Agency: Ministry of Science and Technology (MoST), Government of the Peoples Republic of Bangladesh

Funding Amount: 2,50,000 (BDT)

Position: N/A

2024-07-01 to 2025-06-30 Project

Assessment of exotic eggplant (Solanum melongena l.) genotypes based on morpho-physical and biochemical traits in the southern region of Bangladesh

Abstract:

Funding Agency: NSTU Research Cell (UGC)

Funding Amount: 1,90,000 (BDT)

Position: N/A

2023-07-01 to 2025-06-30 Project

Black Rot Disease: Molecular Detection, Biocontrol and Identification of Resistance Source(s) from the Available Cabbage Genotypes in Bangladesh

Abstract: This project collected and identified Xanthomonas campestris pv. campestris from black rot-infected cabbage, evaluated eco-friendly management options including nanoparticles, melatonin, and seaweeds, and identified disease-resistant cabbage varieties for sustainable disease management and improved cabbage production in Bangladesh.

Funding Agency: BANBAEIS from Ministry of Education (MoE), Government of the Peoples Republic of Bangladesh

Funding Amount: 15,00,000 (BDT)

Position: N/A

2023-07-01 to 2024-06-30 Project

Morpho-molecular characterization and sustainable management of Lasiodiplodia theobromae causing seedling rot/decline disease of melon in Bangladesh

Abstract: This study identified the root rot pathogen of melon through morphological, pathological, and molecular analyses, determined the optimum conditions for mycelial growth and sclerotia formation of Lasiodiplodia theobromae, and evaluated the host range of the pathogen isolates.

Funding Agency: Ministry of Science and Technology (MoST), Government of the Peoples Republic of Bangladesh

Funding Amount: 3,00,000 (BDT)

Position: N/A

2023-07-01 to 2024-06-30 Project

Morphological and molecular characterization of the fungi associated with leaf blight disease of Bottle gourd and Pumpkin in Bangladesh

Abstract: his study isolated and identified Lasiodiplodia spp. causing leaf blight in bottle gourd and pumpkin, generated information to support plant breeding and disease management, and contributed to sustainable crop production, increased cropping intensity, and improved farmers' livelihoods in southern Bangladesh.

Funding Agency: NSTU Research Cell (UGC)

Funding Amount: 1,70,000 (BDT)

Position: N/A

2022-07-01 to 2023-06-30 Project

Physico-morphological and Biochemical Characterization of Exotic Cabbage (Brassica oleracea var. capitata L.) Genotypes in Bangladesh

Abstract: This study evaluated nine exotic and one local cabbage variety under field conditions to identify superior genotypes based on physio-morphological and biochemical traits. Significant variation was observed among the varieties, with V4 and V6 showing superior performance for most growth, quality, and yield-related traits. The findings recommend these varieties for winter cabbage cultivation and breeding programs in Bangladesh.

Funding Agency: NSTU Research Cell (UGC)

Funding Amount: 1,20,000 (BDT)

Position: N/A

2021-07-01 to 2022-06-30 Project

Assessment of Exotic Watermelon (Citrullus sp.) Genotypes by morphological and biochemical traits for Selecting a suitable genotype/s for Crop Improvement Program in Bangladesh

Abstract: This project evaluated the morphological, genetic, and yield performance of Korean tomato varieties under Bangladeshi conditions, identified superior genotypes, and promoted their cultivation among farmers. The study contributed to increased tomato production, improved farmers' income, enhanced food and nutritional security, and secured promising exotic lines as parental materials for future F₁ hybrid development.

Funding Agency: Ministry of Science and Technology (MoST), Government of the Peoples Republic of Bangladesh

Funding Amount: 240000

Position: N/A

2021-07-01 to 2022-06-30 Project

Assessment of Melon Germplasms for Identification of Salt Tolerant Genotypes for Ensuring Food and Nutritional Security in the Coastal Regions of Bangladesh

Abstract: This study evaluated exotic muskmelon genotypes for morphological, genetic, fruit quality, and yield traits under salt stress, identified salt-tolerant genotypes suitable for coastal Bangladesh, and enhanced muskmelon germplasm for future breeding. It also supported the utilization of fallow lands, improved food and nutritional security, and contributed to the socioeconomic development of coastal farmers.

Funding Agency: NSTU Research Cell (UGC)

Funding Amount: 1,30,000 (BDT)

Position: N/A

2020-07-01 to 2021-06-30 Project

Exotic Melon Germplasm Collection, Evaluation and Selection of Suitable Melon Genotype for Ensuring Food and Nutritional Security in Bangladesh

Abstract: This project collected, evaluated, and selected exotic melon germplasm to identify superior genotypes suitable for cultivation under Bangladeshi conditions. The selected genotypes provided valuable breeding materials and contributed to improved melon production, food security, and nutritional security in Bangladesh.

Funding Agency: NSTU Research Cell (UGC)

Funding Amount: 1,20,000 (BDT)

2020-07-01 to 2021-06-30 Project

Exotic tomato germplasm collection, evaluation and suitable variety selection for ensuring food and nutritional security in the southern region of Bangladesh

Abstract: The study identified four to five promising exotic tomato genotypes with higher yield than local varieties in southern Bangladesh. It completed the morphological and biochemical evaluations, performed statistical analyses, selected superior genotypes, and published the research findings in a scientific manu

Funding Agency: Ministry of Science and Technology (MoST), Government of the Peoples Republic of Bangladesh

Funding Amount: 2,00,000 (BDT)

Position: N/A

2019-07-01 to 2020-06-30 Project

Phenotypic evaluation of some botanical plant extracts for their antimicrobial activity against black rot pathogen (Xanthomonas campestris pv. campestris)

Abstract: This study evaluated the antimicrobial activity of botanical plant extracts against Xanthomonas campestris pv. campestris, the causal agent of black rot in cabbage, identified promising plant extracts with strong inhibitory effects, and published the findings in a peer-reviewed scientific manuscript.

Funding Agency: NSTU Research Cell (UGC)

Funding Amount: 90,000 (BDT)

Position: N/A

Last Updated: 2026-07-22 12:11:57

Course Content

Undergraduate level: AG1113: Smart Agriculture (Theory) AG2101: Fundamentals of Plant Pathology (Theory and lab) AG2209: Cytology and Cytogenetics (Theory and lab) AG3109: Genetics (Theory and lab) AG 3207: Diseases of Field Crops (Theory and Lab) AG4205: Plant Biotechnology and Genetic Engineering (Theory and lab) AG4107: Diseases of Fruits, Vegetables, Cash Crops, Agro forestry Trees and Seed Pathology (Theory and lab) Mater of Science: GPB506: Stress Breeding (T) GPB508: Advanced Plant Breeding (T) GPB 512: Research Methodology and Scientific Writing (T) GPB516: Hybrid Breeding (T) GPB 515: Genomics and Bioinformatics (T)

No Course Materials Found....

Phd - 2024-25

Ripu Chandra Das

Enrolled

Thesis Title: Molecular Analysis and Sustainable Management of Club-Root Disease (Plasmodiophora brassicae)

Overview: Enter Project/Thesis Overview

Masters - 2023-24

S. M Sabik

Thesis Title: Evaluation Of Advanced Breeding Lines Of Tomato (Solanum Lycopersicum L.) Via Morphometric And Biochemical Traits

Overview: Enter ProjectThis study evaluated advanced tomato (Solanum lycopersicum L.) breeding lines using morphometric and biochemical traits to identify superior genotypes. The breeding lines showed significant variation in plant growth, fruit characteristics, yield, and biochemical attributes such as total soluble solids, vitamin C, and antioxidant content. The results identified promising lines with desirable agronomic and nutritional qualities for use in tomato breeding programs and future variety development./Thesis Overview

Masters - 2023-24

Mohammad Fayez

Thesis Title: Assessment Of Genetic Diversity Of Some Rock Melon (Cucumis Melo L.) Genotypes Via Morpho- Physiological And Phytochemical Profiling In Bangladesh

Overview: Enter ProjThis study assessed the genetic diversity of rock melon (Cucumis melo L.) genotypes in Bangladesh using morpho-physiological and phytochemical traits. Significant variation was observed in plant growth, fruit characteristics, yield, and phytochemical properties, indicating substantial genetic diversity among the genotypes. The findings identified promising germplasm with superior agronomic and nutritional traits, providing valuable resources for future breeding and crop improvement programs.

Masters - 2021-22

Rabiul Haq Chowdhury

Officer (Bangladesh Govt. Bank)

Thesis Title: Drought-responsive genes in tomato: meta-analysis of gene expression using machine learning

Overview: Enter Project/Thesis Overview

Honors - 2019-20

Rabaya Bousre

Graduated

Thesis Title: EVALUATION OF DIFFERENT BOTANICAL EXTRACTS ON PANTOEA SPECIES CAUSING RICE GRAIN DISCOLORATION DISEASE

Overview: Enter Project/Thesis Overview

Honors - 2019-20

MD. HASHIBUL ALAM ANIK

Graduated

Thesis Title: MORPHO-CULTURAL AND MOLECULAR CHARACTERIZATION OF Trichoderma asperellum AND ITS IMPACT ON MUSTARD SEEDLINGS

Overview: Enter Project/Thesis Overview

Honors - 2019-20

ATIQ HASAN

Graduated

Thesis Title: GENETIC DIVERSITY ANALYSIS FOR MORPHOLOGICAL, YIELD ATTRIBUTING AND BIOCHEMICAL TRAITS IN DIVERSIFIED PUMPKIN GERMPLASM

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Honors - 2019-20

Md: Alamin Hossen

Graduated

Thesis Title: GENETIC DIVERSITY OF WATERMELON (Citrullus lanatus) GERMPLASMS USING MORPHOLOGICAL AND BIOCHEMICAL MARKERS

Overview: Enter Project/Thesis Overview

Honors - 2019-20

Riaz Ahammed

Graduated

Thesis Title: EFFECT OF SEED PRIMING ON GERMINATION AND SEEDLING GROWTH OF SOYBEAN (Glycine max)

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Honors - 2019-20

Nishat Anjum

Graduated

Thesis Title: EFFECT OF DIFFERENT SEED PRIMING AGENTS ON THE GERMINATION AND SEEDLING TRAITS OF MUSTARD (Brassica spp)

Overview: Enter Project/Thesis Overview

Honors - 2019-20

Muksidur Rahman Sabbir

Thesis Title: Effect Of Seed Priming Agents On Germination, Growth, Yield And Post Harvest Qualities Of Okra (Abelmoschus Esculentus L.)

Overview: Enter Project/This study evaluated the effects of different seed priming agents on the germination, growth, yield, and post-harvest quality of okra (Abelmoschus esculentus L.). Seed priming enhanced seed germination, seedling vigor, plant growth, and fruit yield compared to untreated seeds. Primed plants also produced better-quality fruits with improved shelf life and post-harvest characteristics. The findings suggest that seed priming is a simple, cost-effective technique to improve okra productivity and maintain fruit quality after harvest.Thesis Overview

Institutional Email: mehede@nstu.edu.bd
Personal Email: mhrubel_188@yahoo.com
Mobile number: +8801317791081
Emergency Contact: N/A
PABX:N/A
Website:https://scholar.google.com/citations?user=0oHft4AAAAAJ&hl=en Research gate: https://www.researchgate.net/profile/Mehede-Rubel

Department

Agriculture

Noakhali Science and Technology University